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- Sciennes Primary School (Sciennes After School Care Scheme)
- Sciennes Primary School (Scoosh)
- Sighthill Primary School
- South Morningside Primary School
- St Andrew's Fox Covert RC Primary School
- St Catherine's RC Primary School
- St Cuthbert's RC Primary School
- St David's RC Primary School
- St Francis' RC Primary School
- St John Vianney RC Primary School
- St John's RC Primary School (Highland Fling After School Club)
- St John's RC Primary School (Spring Oscars)
- St Joseph's RC Primary School
- St Margaret's RC Primary School (Jets Activity Club - Little Flyers)
- St Margaret's RC Primary School (SQUIDS)
- St Mark's RC Primary School
- St Mary's RC Primary School (Edin - Smart Cookies)
- St Mary's RC Primary School (Edin - St Mary's ASC)
- St Mary's RC Primary School (Leith - CLASP)
- St Mary's RC Primary School (Leith - Gingerbread)
- St Ninian's RC Primary School
- St Peter's Primary School
- Stenhouse Primary School
- Stockbridge Primary School (Bristo Baptist Church)
- Stockbridge Primary School (Daddy Daycare at Stockbridge Primary)